Beginning Perl for Bioinformatics by Tisdall, James

by Tisdall, James | PB | VeryGood
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“May have limited writing in cover pages. Pages are unmarked. ~ ThriftBooks: Read More, Spend ...
Binding
Paperback
Book Title
Beginning Perl for Bioinformatics
Weight
1 lbs
Product Group
Book
IsTextBook
No
ISBN
9780596000806
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Product Identifiers

Publisher
O'reilly Media, Incorporated
ISBN-10
0596000804
ISBN-13
9780596000806
eBay Product ID (ePID)
1951368

Product Key Features

Number of Pages
384 Pages
Publication Name
Beginning Perl for Bioinformatics : an Introduction to Perl for Biologists
Language
English
Publication Year
2001
Subject
Programming Languages / Perl, Operating Systems / Linux, General, Programming Languages / Javascript
Type
Textbook
Author
James Tisdall
Subject Area
Computers
Format
Trade Paperback

Dimensions

Item Height
0.8 in
Item Weight
21.2 Oz
Item Length
9.2 in
Item Width
7 in

Additional Product Features

Intended Audience
Scholarly & Professional
LCCN
2002-277715
Illustrated
Yes
Table Of Content
Preface Chapter 1: Biology and Computer Science Chapter 2: Getting Started with Perl Chapter 3: The Art of Programming Chapter 4: Sequences and Strings Chapter 5: Motifs and Loops Chapter 6: Subroutines and Bugs Chapter 7: Mutations and Randomization Chapter 8: The Genetic Code Chapter 9: Restriction Maps and Regular Expressions Chapter 10: GenBank Chapter 11: Protein Data Bank Chapter 12: BLAST Chapter 13: Further Topics Appendix A: Resources Appendix B: Perl Summary Colophon
Synopsis
With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems. Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers: Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output, This text is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem., A practical introduction to Perl designed for biologists with little or no programming experience. The book approaches programming as an important new laboratory skill, and shows many Perl programs and Perl programming techniques that can be immediately useful in the lab. Each chapter focuses on a problem or class of problems in bioinformatics, and shows how to use Perl to solve them.
LC Classification Number
QA76.73.P22T57 2001

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